Identification and Characterization of Endophytic Fungi from Garcinia atroviridis for Potential Antagonistic Against Phytopathogenic, Colletotrichum gloeosporioides

https://doi.org/10.55230/mabjournal.v52ia.d148

Authors

  • Nur Afeeqah Mohamed Zanudin Faculty of Applied Sciences, Universiti Teknologi MARA, 404500 Shah Alam, Selangor; Faculty of Applied Sciences, Universiti Teknologi MARA, Cawangan Negeri Sembilan, Kampus Kuala Pilah, 72000 Kuala Pilah, Negeri Sembilan, Malaysia
  • Nor'aishah Hasan Faculty of Applied Sciences, Universiti Teknologi MARA, Cawangan Negeri Sembilan, Kampus Kuala Pilah, 72000 Kuala Pilah, Negeri Sembilan, Malaysia; Biotechnology, Microbiology and Environmental Collaborative Science, Universiti Teknologi MARA, Cawangan Negeri Sembilan Kampus Kuala Pilah, 72000, Negeri Sembilan, Malaysia
  • Patayah Mansor Laboratory Mycology and Pathology, Forest Biodiversity Division, Forest Research Institute Malaysia, 52109 Kuala Lumpur, Malaysia

Keywords:

Antagonistic activity, biocontrol agent, endophytic fungi, Colletotrichum gloeosporioides, Garcinia atroviridis

Abstract

Biological control is referred to as the “use of natural or modified organisms, genes” to minimize the effects of undesirable pests, pathogenic microorganisms, and diseases on plant crops. This measure has become a suitable and safe alternative for chemical fungicides in plant disease management. Endophytic fungi have received much attention as biological control agents against many plant pathogens through antibiosis, parasitism, invading spores, mycelium, and cells of the pathogen, and secreting bioactive metabolites. While the therapeutic properties of Garcinia atroviridis have been studied, the existence of microbial endophytes and their properties is still less documented. In this research, G. atroviridis endophytic fungi were isolated and identified by fungal colony morphology observation combined with the PCR-amplified fungal internal transcribed spacer (ITS) sequence analyses. Fungal endophytes were assessed for their biocontrol potential against Colletotrichum gloeosporioides. In total, 111 endophytic fungal isolates harboring inside the leaf, branch, and fruit of G. atroviridis belonged to 5 different species with 3 different genera and two unidentified genera. All the endophytic fungal species isolated were evaluated using an in vitro dual culture assay against C. gloeosporioides, a common pathogen that causes anthracnose disease. The results of the present study clearly showed that seven species of isolated fungal endophytes were capable of inhibiting the mycelial colony growth of C. gloeosporioides with an inhibition percentage between 54.67% to 87.94%. Among these species, Nigrospora sphaerica recorded the highest PIRG with 87.94%. Our work indicates that endophytic fungi isolated from G. atroviridis have a biocontrol effect on C. gloeosporioides and are expected to be a potential source of bioactive metabolites.

Downloads

Download data is not yet available.

Metrics

Metrics Loading ...

References

Adeleke, B.S. & Babalola, O.O. 2021. Pharmacological potential of fungal endophytes associated with medicinal plants: A review. Journal of Fungi, 7(2): 1-16. DOI: https://doi.org/10.3390/jof7020147

Almeida, A.B., Concas, J., Campos, M.D., Materatski, P., Varanda, C., Patanita, M., Murolo, S., Romanazzi, G. & Félix, M.D.R. 2020. Endophytic fungi as potential biological control agents against grapevine trunk diseases in Alentejo region. Biology, 9(12): 9120420. DOI: https://doi.org/10.3390/biology9120420

Cao, R., Liu, X., Gao, K., Mendgen, K., Kang, Z., Gao, J., Dai, Y. & Wang, X. 2009. Mycoparasitism of endophytic fungi isolated from reed on soilborne phytopathogenic fungi and production of cell wall-degrading enzymes in vitro. Current Microbiology, 59(6): 584-592. DOI: https://doi.org/10.1007/s00284-009-9477-9

Choudhary, M., Gupta, S., Dhar, M.K. & Kaul, S. 2021. Endophytic fungi-mediated biocatalysis and biotransformations paving the way toward green chemistry. Frontiers in Bioengineering and Biotechnology, 9: 664705. DOI: https://doi.org/10.3389/fbioe.2021.664705

Chowdhary, K. & Kaushik, N. 2015. Fungal endophyte diversity and bioactivity in the Indian medicinal plant Ocimum sanctum Linn. PLoS ONE, 10(11): 141444. DOI: https://doi.org/10.1371/journal.pone.0141444

Corlett, R.T. 2016. Plant diversity in a changing world: Status, trends, and conservation needs. Plant Diversity, 38(1): 10-16. DOI: https://doi.org/10.1016/j.pld.2016.01.001

Deepthi, V.C., Sumathi, S., Faisal M. & Elyas, K.K. 2018. Isolation and identification of endophytic fungi with antimicrobial activities from the leaves of Elaeocarpus sphaericus (Gaertn.) K. Schum. and Myristica fragrans Houtt. International Journal of Pharmaceutical Sciences and Research, 9(7): 2783-2791.

Gashgari, R., Gherbawy, Y., Ameen, F. & Alsharari, S. 2016. Molecular characterization and analysis of antimicrobial activity of endophytic fungi from medicinal plants in Saudi Arabia. Jundishapur Journal of Microbiology, 9(1): 1-8. DOI: https://doi.org/10.5812/jjm.26157

Gershenzon, J. & Ullah, C. 2022. Plants protect themselves from herbivores by optimizing the distribution of chemical defenses. Proceedings of the National Academy of Sciences of the United States of America, pp. 10-12. DOI: https://doi.org/10.1073/pnas.2120277119

Gimenez, C., Cabrera, R., Reina, M. & Gonzalez-Coloma, A. 2007. Fungal Endophytes and their Role in Plant Protection. Current Organic Chemistry, 11(8): 707-720. DOI: https://doi.org/10.2174/138527207780598765

Hamıdon, H., Susanti, D., Taher, M. & Zakaria, Z.A. 2017. Garcinia atroviridis- A review on phytochemicals and pharmacological properties. Marmara Pharmaceutical Journal, 21(1): 38-47. DOI: https://doi.org/10.12991/marupj.259879

Hamzah, T.N.T., Lee, S.Y., Hidayat, A., Terhem, R., Faridah-Hanum, I. & Mohamed, R. 2018. Diversity and characterization of endophytic fungi isolated from the tropical mangrove species, Rhizophora mucronata, and identification of potential antagonists against the soil-borne fungus, Fusarium solani. Frontiers in Microbiology, 9: 1707. DOI: https://doi.org/10.3389/fmicb.2018.01707

Ibrahim, D., Chai Lee, C., Yenn, T. W., Zakaria, L. & Sheh-Hong, L. 2015. Effect of the extract of endophytic fungus, Nigrospora sphaerica cl-op 30, against the growth of ethicillin-resistant Staphylococcus aureus (MRSA) and Klebsiella pneumonia cells. Tropical Journal of Pharmaceutical Research, 14(11): 2091-2097. DOI: https://doi.org/10.4314/tjpr.v14i11.20

Kandel, S.L., Firrincieli, A., Joubert, P.M., Okubara, P.A., Leston, N.D., McGeorge, K.M., Mugnozza, G.S., Harfouche, A., Kim, S.H. & Doty, S.L. 2017. An in vitro study of bio-control and plant growth promotion potential of Salicaceae endophytes. Frontiers in Microbiology, 8: 386. DOI: https://doi.org/10.3389/fmicb.2017.00386

Katoch, M. & Pull, S. 2017. Endophytic fungi associated with Monarda citriodora, an aromatic and medicinal plant and their biocontrol potential. Pharmaceutical Biology, 55(1): 1528-1535. DOI: https://doi.org/10.1080/13880209.2017.1309054

Kaul, S., Gupta, S., Ahmed, M. & Dhar, M.K. 2012. Endophytic fungi from medicinal plants: A treasure hunt for bioactive metabolites. Phytochemistry Reviews, 11(4): 487-505. DOI: https://doi.org/10.1007/s11101-012-9260-6

Khare, E., Mishra, J. & Arora, N.K. 2018. Multifaceted interactions between endophytes and plant: Developments and Prospects. Frontiers in Microbiology, 9: 2732. DOI: https://doi.org/10.3389/fmicb.2018.02732

Liu, A., Wu, S., Xu, T. & Jeewon, R. 2010. Endophytic Pestalotiopsis species associated with plants of Palmae, Rhizophoraceae, Planchonellae and Podocarpaceae in Hainan, China. African Journal of Microbiology Research, 4(24): 2661-2669.

Mandavid, H., Rodrigues, A.M.S., Espindola, L.S., Eparvier, V. & Stien, D. 2015. Secondary metabolites isolated from the Amazonian Endophytic Fungus Diaporthe sp. SNB-GSS10. Journal of Natural Products, 78(7): 1735-1739. DOI: https://doi.org/10.1021/np501029s

Manganyi, M.C. & Ateba, C.N. 2020. Untapped potentials of endophytic fungi: A review of novel bioactive compounds with biological applications. Microorganisms, 8(12): 1-25. DOI: https://doi.org/10.3390/microorganisms8121934

Mengistu, A.A. 2020. Endophytes: Colonization, behaviour, and their role in defence mechanism. International Journal of Microbiology, 2020: 6927219. DOI: https://doi.org/10.1155/2020/6927219

Miguel, P.S.B., Delvaux, J.C., Oliveira, M.N.V., Moreira, B.C., Borges, A.C., Totola, M.R., Neves, J.C.L. & Costa, M.D. 2017. Diversity and distribution of the endophytic fungal community in eucalyptus leaves. Africa Journal Microbiology Research,11: 92-105.

Naidu, Y., Idris, A.S., Madihah, A.Z. & Kamarudin, N. 2016. In vitro antagonistic between endophytic basidiomycetes of oil palm (Elaeis guineensis) and Ganoderma boninense. Journal of Phytopathology, 164(10): 779-790. DOI: https://doi.org/10.1111/jph.12498

Patra, J.K., Gouda, S., Das, G.K., Sen, S. & Shin, H.S. 2016. Endophytes: A treasure house of bioactive compounds of medicinal importance. Frontiers in Microbiology, 7: 1538. DOI: https://doi.org/10.3389/fmicb.2016.01538

Phongpaichit, S., Rungjindamai, N., Rukachaisirikul, V. & Sakayaroj, J. 2006. Antimicrobial activity in cultures of endophytic fungi isolated from Garcinia species. FEMS Immunology and Medical Microbiology, 48(3): 367-372. DOI: https://doi.org/10.1111/j.1574-695X.2006.00155.x

Pillai, T.G. & Jayaraj, R.J. 2015. Colletotrichum gloeosporioides: A true endophyte of the endangered tree, Cynometra travancorica in the western Ghats. Journal of Plant Pathology and Microbiology, 6: 5. DOI: https://doi.org/10.4172/2157-7471.1000267

Rajani, P., Rajasekaran, C., Vasanthakumari, M.M., Olsson, S.B., Ravikanth, G. & Uma Shaanker, R. 2020. Inhibition of plant pathogenic fungi by endophytic Trichoderma spp. through mycoparasitism and volatile organic compounds. Microbiological Research, 242: 126595. DOI: https://doi.org/10.1016/j.micres.2020.126595

Rosli, N.M., Abu Hasan Ashari, K.I. & Azmi, N.S.A. 2020. Isolation and preliminary screening of endophytic fungi from Ficus carica for biocontrol and phosphate solubilization. Environment and Ecosystem Science, 4(2): 77-84. DOI: https://doi.org/10.26480/ees.02.2020.77.84

Saad, M.M.G., Ghareeb, R.Y. & Saeed, A.A. 2019. The potential of endophytic fungi as bio-control agents against the cotton leafworm, Spodoptera littoralis (Boisd.) (Lepidoptera: Noctuidae). Egyptian Journal of Biological Pest Control, 29(1): 1-7. DOI: https://doi.org/10.1186/s41938-019-0108-x

Scott, M. 2016. Isolation and characterization of endophytic microorganisms from industrial hemp plant (Master). McGill University.

Shankar Naik, B., Krishnappa, M. & Krishnamurthy, Y.L. 2014. Biodiversity of endophytic fungi from seven herbaceous medicinal plants of Malnad region, Western Ghats, southern India. Journal of Forestry Research, 25(3): 707-711. DOI: https://doi.org/10.1007/s11676-014-0511-9

Sultana, N., Alsarhan, A., Al-Khatib, A. & Kadir, M. 2014. Review on some Malaysian traditional medicinal plants with therapeutic properties. Journal of Basic and Applied Sciences, 10: 149-159. DOI: https://doi.org/10.6000/1927-5129.2014.10.20

Sun, J.Q., Guo, L. D., Zang, W., Ping, W.X. & Chi, D.F. 2008. Diversity and ecological distribution of endophytic fungi associated with medicinal plants. Science in China, Series C: Life Sciences, 51(8): 751-759. DOI: https://doi.org/10.1007/s11427-008-0091-z

Ujamp, N.T., Ezep, P.M., Ejikeugwup, C., Festus, P., Okoyep, B.C. & Esimonep, C.O. 2020. Antimicrobial activity of metabolites of Lasiodiplodia theobromae isolated from Psiduim guajava. International Journal of Innovative Science, Engineering and Technology, 7(2): 123-129.

Umesha, S., Manukumar, H.M. & Raghava, S. 2016. A rapid method for isolation of genomic DNA from food-borne fungal pathogens. 3 Biotech, 6(2): 123. DOI: https://doi.org/10.1007/s13205-016-0436-4

Venieraki, A., Dimou, M. & Katinakis, P. 2017. Endophytic fungi residing in medicinal plants have the ability to produce the same or similar pharmacologically active secondary metabolites as their hosts. Hellenic Plant Protection Journal, 10(2): 51-66. DOI: https://doi.org/10.1515/hppj-2017-0006

Yu, J., Wu, Y., He, Z., Li, M., Zhu, K. & Gao, B. (2018). Diversity and antifungal activity of endophytic fungi associated with Camellia oleifera. Mycobiology, 46(2): 85-91. DOI: https://doi.org/10.1080/12298093.2018.1454008

Zheng, Y.K., Miao, C.P., Chen, H.H., Huang, F.F., Xia, Y.M., Chen, Y.W. & Zhao, L.X. 2017. Endophytic fungi harbored in Panax notoginseng: Diversity and potential as biological control agents against host plant pathogens of root-rot disease. Journal of Ginseng Research, 41(3): 353-360. DOI: https://doi.org/10.1016/j.jgr.2016.07.005

Zuhria, S.A., Djauhari, S. & Muhibuddin, A. 2016. Exploration and antagonistic test of endophytic fungi from soybean (Glycine max L. Merr) with different resistance to Sclerotium rolfsii. The Journal of Experimental Life Sciences, 6(2): 101-105. DOI: https://doi.org/10.21776/ub.jels.2016.006.02.08

Published

31-10-2023

How to Cite

Zanudin, N. A. M. ., Hasan, N. ., & Mansor, P. (2023). Identification and Characterization of Endophytic Fungi from Garcinia atroviridis for Potential Antagonistic Against Phytopathogenic, Colletotrichum gloeosporioides. Malaysian Applied Biology, 52(4), 97–106. https://doi.org/10.55230/mabjournal.v52ia.d148